YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71064880, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTYSLSTSLS KPLTLVAFMA LALAGCNNNS QTSTETTNTN GTLDKIKESG TIVVGHRDSS  60
   61 IPFSYIADDP NQPIGYAHDL EMKVVEAVKQ KLNMPDLKIR YNLITSQTRI PLVQNGTVDF 120
  121 ECGSTTNNEE RQKQVAFSNG FFEIGTRLLT KKDSGIQGFD DLKGKTLVTT AGTTSERYIR 180
  181 EYNDDKKMNI NIISAKDHGE GFLMLENGRA EAFMMDDVLL AGEKAKAKNP DEWVIVGEPQ 240
  241 SFEIYGCMMR KDDPEFKAVV DDALATVFKS GEINSIYDKW FLNPIPPKNV NLKFEMSDNL 300
  301 KALIANPHDS DQPKVATAQ

Type	Start	End	Confidence
Signal Peptide	1	28	0.95
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	319	0.99