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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76583467, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEQKLSHSP GYDRDSCSAR SKPGGEAIQR RERVARRTPE PCGRPRACAV RRQRHRKIHV  60
   61 PEHPDGAFAP RRGHDPAERP RCRFRVARRS ARKPHGDHHA GALAGAGDDG RREPVSWPRA 120
  121 HPRGRRRRFP RAEAPRAGAA RPARLRDRRG RADASAEPRA DAARRDRESV QPRLPGDDHG 180
  181 RADFRDRRAR DRDAVRRGPQ RHRARRGHHL RVAPAERAIR HRRRLHGVSR RRVRRERPPR 240
  241 RYRPRASRAR DRRPRDARRR QGAPARARRA VPEGGGPHAR ERVRGREPRR AARRDSRHLW 300
  301 ADGLGPQRIP QLRVWLDAPR RGRRHPRRQA AAARRARAVD PRGHRARHRG PQGFGPRALR 360
  361 QRAGEHRDGR VPPPVARRRD PALARAAARA GDGRAAADQG RFAAHAGIGD ERRQPAEGRA 420
  421 REMPVDRARA AAVRRADARH RRRRETGDLP AARCVRARRR RGDRRVVGGA RAAVSERPDR 480
  481 RVQGRPRRRR PPGRRRHPGI PAPSRFMNKT MNTQTLSRLD AAPRRVNVAE LASRFGIPIV 540
  541 FVALCVVLAF ASPYFLTWRN WSDILRQTSI NGILAIGMTY VILTKGIDLS VGSVLALAGI 600
  601 VSGLAGAAGH GLAVSLAAGV ACGAALGAIN GVAIARLNVP PFVATLGMLS VARGVTYIAN 660
  661 DGSPVANLPD DYLSLGIGRL GPLGMPVLIF AGVALACWWV LRYTTYGRYL YAVGGNEKSA 720
  721 RTSGIGVRKV VFSVYVVSGA LAGLAGMILA ARTTSALPQA GVSYELDAIA AVVIGGTSLS 780
  781 GGQGGVVGTL FGALLIGVIN NGLNLLGVSS YYQQIAKGLI IVLAVLIDVA RKQQR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle