YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|76817803, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGARRLGSQ PARARCVVAP RGARFRLQTT MKQTFLAPQK DLLLLLSRIL LVILFVIFGW  60
   61 EKLLNFSGTA QFMAAEGTPL PSIAAVVAVA MEFFVGIALL LGFCTRPLAL LLGLYTLGTA 120
  121 FIGHHYWSMP AAEQMNMMIH FYKNIAIAGG LLALCAAGPG RYSLDRG

Type	Start	End	Confidence
Cytoplasmic	1	41	0.97
Transmembrane Helix	42	60	0.93
Non-Cytoplasmic	61	79	0.83
Transmembrane Helix	80	101	0.92
Cytoplasmic	102	107	0.74
Transmembrane Helix	108	128	0.90
Non-Cytoplasmic	129	140	0.88
Transmembrane Helix	141	164	0.83
Cytoplasmic	165	167	0.94