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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76581979, gi|...
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGCHHEFLE KTPHRHCRAA RIVRRARSIR ARRAPCAAGR TSCARLARAE AGGRYSTSGR  60
   61 RNALRLREHR SEPPSPLHRA SRRRGDRRLR SARVASHGAH RRRIVRAWRA CRYRAIARVR 120
  121 IGHGNRRSRR HRRTDTEDRR AHSGRALPGR NGLRARSIQA VRFGRIRGNR DGHRHTDEPA 180
  181 HRDDCARRRS RQHAIRSVLP PRVRERPDAC AACRDRSGTG PDRQSIRPSW RQGQPWVADR 240
  241 LARSARVHRL RRKRQTSDSR YALDANRPIV RHRREPGCAC IRSVARDAVR RGRGRRHIEV 300
  301 PRRGERRPKD RRGPARGPCP CRCGGPVDAP VVLPIEEYRW TARVARHAAC VTEVRRSRAN 360
  361 VHARMDAWKR RLGPLRKSGL GHRFRESCPH RQTIRPPPYP VPATILKTVS VLYRTHPLHS 420
  421 LRHPCFDSAD EESITMNYLT LSALPAGMLF ALVTSITPGP NNTMLLASGV NFGFRRTLPH 480
  481 MFGISAGVAI LMLSVGFGLG EAFKRIPILY TLLETASVVY LLYLAWRIGT SGEVRAHNGK 540
  541 SRPMTFVEAI AFQWVNPKAW MMVLTAATTI QLSADYGRNA VWMALVFVFV GLPCISVWAA 600
  601 FGQGLRGFLS NPRWLRVFNL TMATLLVLSL YPMFAKVSGH 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle