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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76809336, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSTHSALAK SSVNPIMSPD CAFHRSGDRR RCGSYGENPH MRANLPVTQR EYDFPDDATL  60
   61 MSTTDPQSYV TYANAAFIQV SGFERDEIIG EPHNFVRHPD MPTEAFADMW ATLKAGRSWT 120
  121 AVIKNRRKDG DHYWVRANAT PVIRNGQLVG YMSVRTKPSR EEIAQADALY RDLREHRARG 180
  181 RKFHQGLVVR TGLFGWMSLL QTMSARWRVR AALLALLAGS AWTAFLFGLH GVMFEGFAAT 240
  241 ETVLLLLAEC WLAAQITAPL QRVLKQSLAV AAGQAGDNVH LNRVDEIGMI MRAVNQAGLN 300
  301 LRSLVDDVSE QLSGLQGASG KIAAGNDDLS GRSEQAAASL EETAASMEQM TATVRNNADT 360
  361 ATQAGQLAGS TSAAAEKGDA VVGQVVATMG EISASSRKIS EIIGVIDSIA FQTNILALNA 420
  421 AVEAARAGEQ GRGFAVVAAE VRTLAQRSAN AAKEIAALIH DSVQKTAAGS ALVDQAGDAM 480
  481 NEIRSQVAQV AGLIGEIGSA TREQSDGIGQ VNVAVTQLDK MTQQNAALVQ ESASTADELK 540
  541 RRTQRLVDAV AVFRVNARVP ARHDDARAPR AGAAAAMRER ASVARPRPAM RAAPAPSLAL 600
  601 ANASTAQAPA RATANADADW QTF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle