YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|225928352, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRACTALSL CPKKSFCYIT SGFIRSSRGH RHQKQSSARH NKFVILGDLL MKKSLLALVA  60
   61 LSAFAGAAHA QSSVTLYGII DEGFNINTNA GGKHLYNLSS GVMQGSRWGL RGTEDLGGGL 120
  121 KALFVLENGF DVNSGKLNQG GLEFGRQAYV GLSSGFGTVT LGRQYDSVVD FVGPLEAGDQ 180
  181 WGGYIAAHPG DLDNFNNAYR VNNAVKFTSA NYGGFTFGGL YSFGGVAGDF SRNQTWSLGA 240
  241 GYTNGPLVLG VGYLNARTPS TAGGLFGNNT TSSTPAAVTT PVYAGYASAH TYQVIGAGGA 300
  301 YSFGAATVGI TYSNIKFMNF ASTVFPNQTA TFNNAEINFK YQLTPTLLAG AAYDYTQGSK 360
  361 IAGSSAAKYH QGSVGVDYFL SKRTDVYAIG VYQHASGNVI EADGNTVGPA TAAINGLTPS 420
  421 SNRNQFAARV GIRHKF

Type	Start	End	Confidence
Signal Peptide	1	70	0.97
N-region	1	61
H-region	62	67
C-region	68	70
Cleavage Site	70	71
Non-Cytoplasmic	71	436	0.95