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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|68159722
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRRLFFCV LLSILTLFIN GPLVTTAQSP PSSTSCNRIC GRIEIPFPFG IGRRDCFLND  60
   61 WYEVVCNSTT SGKSLAPFLY KINRELVSIT LRSSIDSSYG VVHIKSPVTS SGCSQRPVKP 120
  121 LPLNLTGKGS PFFITDSNRL VSVGCDNRAL ITDIESQITG CESSCDGDKS RLDKICGGYT 180
  181 CCQAKIPADR PQVIGVDLES SGGNTTQRGN CKVAFLTNET YSPANVTEPE QFYTNGFTVI 240
  241 ELGWYFDTSD SRLTNPVGCV NLTETGIYTS APSCVCEYGY FSGFGYSNCY CNQIGYRGNP 300
  301 YLPGGCIDID ECEEGKGLSS CGELTCVNVP GSWRCENGVG KIKPLFPGLV LGFTLLFLVL 360
  361 GIWGLIKFVK KRRKIIRKRM FFKRNGGLLL KQQLTTRGGN VESSKIFSSK ELEKATDNFN 420
  421 MNRVLGQGGQ GTVYKGMLVD GRIVAVKRSK VLDEDKVEEF INEVGVLSQI NHRNIVKLMG 480
  481 CCLQTEVPIL VYEHIPNGDL FKRLHHDSDD YTMTWDVRLR IAVEIAGALA YLHSAASTPV 540
  541 YHRDVKTTNI LLDEKYRAKV SDFGTSRSIN VDQTHLTTLV AGTFGYLDPE YFQTSQFTDK 600
  601 SDVYSFGVVL VELITGEKPF SVMRPEENRG LVSHFNEAMK QNRVLDIVDS RIKEGCTLEQ 660
  661 VLAVAKLARR CLSLKGKKRP NMREVSIELE RIRSSPEDLE LHIEEEDEEE CAMEINMDDS 720
  721 WSVDMTAPAS LFDLSPKLDV EPLVPQRTW

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle