YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|77174309, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKQKIAVLG PGSWGTALAQ VLNDNGHEVR LWGNVVEQIE EINTNHTNQR YFKDITLDSK  60
   61 IKAYTNLEEA INNVDSILFV VPTKVTRLVA KQVANLLKHK VVIMHASKGL EPGTHERLST 120
  121 ILEEEISEQY RSDIVVVSGP SHAEEAIVRD ITLITAASKD IEAAKYVQKL FSNHYFRLYT 180
  181 NTDVVGVETA GALKNIIAVG AGALHGLGYG DNAKAAIITR GLAEITRLGV QLGADPLTFS 240
  241 GLSGVGDLIV TGTSVHSRNW RAGDALGRGE KLEDIEKNMG MVIEGISTTK VAYEIAQNLN 300
  301 VYMPITEAIY KSIYEGANIK DSILDMMSNE FRSENEWH

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	338	0.99