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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75490187, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKHFVRCWL WALVALFTTK RAPAFNLDIS KPTVFSGPPG SYFGFSVAFF NPDNSQFNIL  60
   61 VGAPRANTSD QTPSAVTERG AVFSCPWQKS GTCTQIQFDS TDDRKHSNGQ QMEFKSNQWF 120
  121 GATVRSSGDQ ILACAPLYQW STYGFSEREP VGTCYLKKGN NIVEYSPCRS KSNSPEGQGF 180
  181 CQAGFSADFV KKNRVVIGGP GSFYWQGQLI SDDVTEVINR YNKDFLTPYS NQLSTKPAGA 240
  241 QYDDSYLGYS VAVGDFNEDG EDDYVTGVPR GEKALGYVNI FNGRNMESMY NFTGTQMAAY 300
  301 FGHSVAAVDV NNDGKMDLFV GAPLFMDRGS DGKLREVGQV YVYLGKGGFT FNSVIKLTGS 360
  361 EIYARYGSSV CSVGDLNMDG YNDVAIAAPY GGPFHRGLVY IHNGRSTGPN PVASQVLEGT 420
  421 WASVSMPSSF GYSMNGGTDV DQNGYPDLIV GAFGADKAIL YRARPVISVN TTLDISPQIL 480
  481 NPEDKSCTLP GTATKVSCFT VKYCLKASGK GAPSSLLFQV DLTLDRLKHK GAIKRVLFLY 540
  541 NKMSHYSKNM TVNNNQGLAC EELQAYLIDD SEFRDKITPI SVFMEYSLDY KSAADKTGLL 600
  601 PILDQSAPTN VTKQAHILLD CGEDNICKPD LKLSVVSDQN EIYIGDDNPL TLEVTAENGG 660
  661 EGAYEADLIV TLPSQADFTA VVRNSETLSR LSCAFKKDNQ TRVVVCDLGN PMKGGTKIVA 720
  721 GLRFSVHQLS EQDTEVKFGL QIQSTNQFNN TSNLVSVVTK LAVLAKVELR GVSAPEQVFL 780
  781 PIANWQPKEN PVLEDDIGPL VQHIYELRNK GPSTFSKAIL DVQWPYRFNN GSLLYITKFS 840
  841 VDGNMNCSSN RELNPLNVTS PRFLDQNDTS ASGAEGRNRH NVHRRDLEEK HGEENLEILD 900
  901 CGNAECQEIK CFVGRLEKGQ SAILFIYSRL AVNTFLKAES QNKSYIVRSS ASFSVIEMPY 960
  961 KNLNPELPTS TQSASLKVIW NSENPQPVPG WVVALAVLAG LLLLALLIFV MYKLGFFNRV1020
 1021 RPPQEDRTEK EQLQPQENGD RNTEA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle