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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|76151977
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTCASCAQTV EKAAKKVRGV TQASVNLATE KLSIEYDEPT FSVENLQKAV DNSGYELIAQ  60
   61 EGTTQTFAIE GMTCASCAQT IEKAVGKLSG VDKASVNLAT EKMQVSYNPS AISVSDVTGA 120
  121 VSNSGYAAVL ETTETQDNSR AEKREKKEKR MKQLSNRFGI SIIFTIPLLI ISMGPMVGMP 180
  181 LPNIVDPMIN AFNFSLLQLI LTLPIMVVSW EYFQKGFKTL FKGHPNMDSL IALGTAAAFV 240
  241 YSLAATIGAG LGYGNFSDLL YYEVTGVILT LHTLGLFLEE RSKGQMSSAI EKLVNLVPKT 300
  301 ARVIRNGVEQ EITVDEVALG DVIRVRPGES MPVDGVVVEG RTSVDESMLT GESIPVEKES 360
  361 GDEVIGASIN KNGSIDYRAT RVGSDTTLSQ IIKLVEDAQG SKAPIARMAD IITRYFVPIV 420
  421 IALAVLAGIA WLIAGQSGIF ILSVIITTLV IACPCALGLA TPTSIMVGTG KGAEHGVLIK 480
  481 SGEALETTHN LDTIVFDKTG TLTEGKPIVT DILVTPLITK ENLLYYAASG ETGSEHPLGE 540
  541 AIVQKSKEEN MTLAKPDHFE AIPGHGIRVE IEGKDMYIGN RKLMLEQKID LSSMEKESNR 600
  601 LADEGKTPMY LSVDGELAGI IAVADTLKEN SMKAVKELRR RGVEVIMITG DNKRTAKAIA 660
  661 KQVGIDSVLS EVLPEDKAEE VKKLQEAGKK VAMVGDGIND APALAQADIG IAVGSGTDVA 720
  721 IESADIVLMR NDLTAVLTAI DLSHATLRNI KQNLFWAFAY NLVGIPVAMG LLYIFGGPLM 780
  781 NPMFAAVAMS FSSVSVLLNA LRLRRFKPAV V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle