YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74268015
Protein type:	Transmembrane
Type Confidence:	0.70
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALWRLSVL CGAREGRALF LRTPVVRPAL VSAFLQDRPA QGWCGTQHIH LSPSHHSGSK  60
   61 AASLHWTGER VVSVLLLGLI PAAYLNPCSA MDYSLAATLT LHSHWGIGQV VTDYVHGDAV 120
  121 QKAAKTGLLV LSAFTFAGLC YFNYHDVGIC KAVAMLWKL

Type	Start	End	Confidence
Cytoplasmic	1	70	0.64
Transmembrane Helix	71	85	0.55
Non-Cytoplasmic	86	125	0.73
Transmembrane Helix	126	145	0.61
Cytoplasmic	146	159	0.46