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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|89266846, gi|...
Protein type: Transmembrane
Type Confidence: 0.78
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLLFLERFP WPSLRTYTGL SGLLLGLSLL SAYRSLSGEA AERSMLEGEE AGAQLPPEPV  60
   61 DLVELFRYLV SDSLGVWVLV NTVCCLLMLI AKLIQHVVFG PLRVGERQHL KDKFWNFIFY 120
  121 KFIFIFGVLN VQTVEEVVLW FLWFAGLLFL HLMVQLCKDR FEYLSFSPTT PMSCHMRVLV 180
  181 LLNIMLLACC GLAVLCAIAG YTHGMHTLAF MAAECMLVTT RTTHVVLRYV IHLWDLNHEG 240
  241 TWEGKGTYVY YTDFVMELSH LSIDLMHHIH MLLFGNIWLS MASLVIFMQL RHLFHEFQRR 300
  301 IRRHKNYLRV VGNMEAHFAV ATPEELEANS DDCAICWDSM QSARKLPCGH LFHNSCLRSW 360
  361 LEQDTSCPTC RMSLNMADGT RTRVEQQREN QDQNAVPLAV TEGRPRLNHH NHFFHFDGSR 420
  421 FASWLPSFSV EVMHTTNILG LAQASNSQLN AMARQVLDMF PQVPYHLVLQ DLQLTRSVEI 480
  481 TTDNILEGRI QVPFPTQHQD DVRSATETSE VSAQEESSTA TQTERVNLDL SPGLEEYEDF 540
  541 SVIEAQVSDV EEFEARGSRF SKSAEERQRM LVQRKEDMVQ LARRRFLNRT SEEDNPDCSS 600
  601 ERGSHTDSSS DSTTVRRRML AAAAERRIQM QQSPQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle