YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|69215356
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENGIDSSIF LSYWPSAGGF GFNTNILGTN LINLSVVLGV LIYFGKGVCA GCILSNLLDN  60
   61 RKQKILNTIR NSEELCKGAT DQLEKARTRL REVERRAGEI RVNGYSQIER EKEDLINAAY 120
  121 ENLERLEDPK NETVHFEQQR AIDQVRQQVS RQALRRALGT LNSRLNSELH LRTINHSIGL 180
  181 LRAMRNTTD

Type	Start	End	Confidence
Cytoplasmic	1	9	0.54
Transmembrane Helix	10	29	0.62
Non-Cytoplasmic	30	35	0.55
Transmembrane Helix	36	58	0.67
Cytoplasmic	59	189	0.81