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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|75910396, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMIFTLKIAS LTFWKSIHLR LNFTHSKKQF IHMKRWLLAN LIALCSFLFL GTNAAWAVGG  60
   61 GIAPGAPGVS SVWSYAGKQG IGTSYEQYVD NKYSDRAPTN AISKVWFSIA QGIVTETAYG 120
  121 EIDRAQINDL QFLVTGNGFF DEEKVSTTSK VDYLDKDKDG RPLSPAYRVI NKDKDGKYTI 180
  181 EKHIFTDPDH QTLFTKVIFT AKEDNVTPYI LINPHMNNTG KEDVAFVKSD SLNAREGEIV 240
  241 YLSLKSSLPF VKTSAGYVAR SDGYQDLKDN GVMDWTYDYT DQSKPGSVAM IGQLPTLNKG 300
  301 QTSTFNIAVG FGSTYQEATE QVDASLKEGY ESLLAKYNGK GSAVGWEDYL ASLKNLPAMI 360
  361 ANTGDKGKQL YASAFTLKSM EDKENPGALI ASLSVPWGDT VNADTFATGY RAVWPRDFYQ 420
  421 AAMALLALGD KETPLTAFKY LPQVQVQSDT PGNAGATGWF LQKTHVDGTL EWLGVQLDQT 480
  481 AMPIMLGWKL WKAGVLSDGE ITEQYRTMLK PAAEFLANGG NVNIHTSDQA NNRKINPPST 540
  541 HQERWEEQSG YSPSTTAAII TGLVAAGDIA ENAADDPLAA KYYFSKADEY QKNVDKFMFT 600
  601 TTGDIKNCNS SSEYLLRVTP NADPNDGSRI HDNNSLLEAD ERQILDGGFL ELVRYGVRKG 660
  661 DDAHIAASVC ALDNISLSED LRVRYDIPFD GKKYPGFRRY GNDGYGEQIN DGSNFRDIDD 720
  721 GQKKLRRGRI WPFFTGERGH YELELAKAKN GGTISDQDVA KLRDTYVRAM EYFANESLML 780
  781 PEQVWDGVGE NKAHNYITGE GTNSATPLAW AHAEYIKLVK SLTDKNVWDS YPIVQARYQS 840
  841 SESLTASSSH PNGTKISANP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle