YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|75907071, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNMALISVI IPAYNAELTI KKTIESVQNQ TFTDWEIIVI NDGSTDKTPE IIQSIKDERL  60
   61 KIFNYKNGGL PVARNRGILH ATGEFIAFLD ADDLWTVDKL ERQLKALQQH PKAGVAYSWT 120
  121 CFMDVDEQGE PLAYLPSSPY SFTGNVYQNL LVSDFIHSGS NTLIRKEAIN SVGEFDPMLK 180
  181 SCEDWDYWLR LATNWDFVVV PEYQIFYRRT PGAMSSKVEV MKEACLIAME KAYQAAPPQL 240
  241 QYLKKYTMSS FHLYCSSLYI QHRDDKFAIS QAQQHLLAAI GLNQKILLEK TTQKLLIKFL 300
  301 LKKIFPPQVT NYVLQLTKKR ISLNVPRLEA

Type	Start	End	Confidence
Signal Peptide	1	16	0.63
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	330	0.99