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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71737164, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQSSPPARI DFNTPAMVRK RRVRAFKDRL THWYVAIGGL AVLAAITLIF FYLAYVVAPL  60
   61 FKGASLTSEP VLNTAWMQDA GAPLMIAIEE QNQIGMRISD KGEVIFFNVK DGAELHKVAL 120
  121 PLPAGVSVAS IGKDQPGAPL IALGLSNGQV LVFRHSYLTT YPNNQKTITP SVAWPYGEAP 180
  181 LVLNEAGRAV EHVTVSADGD SLKLAGSTGT QLHVISLEQK ENMMTGEMTR EQTRIELPQM 240
  241 SAAVKAIYID PRQQWLYVIN GRAQADVFSL RDRTLNGRYK LLEDGNAEIT ASAQLVGGIS 300
  301 LIIGNSKGSM SQWFMARDTD GEQRLMRIRD FKMGSAPIEQ IKAEQRRKGF IALDASGKLG 360
  361 VFHSTAHRTL LIDKVTDGPG ILALSPRANR VLIESAGKLL PLALDNPHPE VSWSSLWGKV 420
  421 WYENYDEPKY VWQSTASNSD FEPKLSLAPL TYGTLKAAFY AMLLAAPLAV AAAIYTAYFM 480
  481 APGMRRKVKP VIELMEAMPT VILGFFAGLF LAPYLEGHLP GIFSLLLLTP IGILLAGFFW 540
  541 TRLPDSLRLR VPDGWEGAIL IPVVLLVGWF SLSMSPHLES WFFGGDTSTW IRDQLGITYD 600
  601 QRNALVVGIA MGFAVIPNIY SIAEDAVFSV PRSLTLGSLA LGATPWQTLT RVVILTASPA 660
  661 IFSALMIGMG RAVGETMIVL MATGNTPIMD MNLFEGMRTL AANVAVEMPE SEVGGSHYRV 720
  721 LFLAALVLLM FTFVMNTLAE LIRQRLRKQY SAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle