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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71736579, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIISLSPKPA CLALLLCLAA GAAHASPPMD LNLTRWAENA SFKAQSASFL PGSDGTRRLA  60
   61 ASVKAGLLLL DEQGRELAKM PGSFQGLDSR TTGSSVLIAT LDNARQQAML TQLDPTGAHW 120
  121 SKPVYLPARD YSVAGLCLYR DDASNLFVFL VGEEGKGEQW LIGADNRLND APRLVRNLPL 180
  181 PPKAEFCQVD DAAHRLFVNE QNIGWWAYSA HPEAEVARQP VALREPFGDL KQAAGAMAIV 240
  241 PGGLLALDPK GKALHLYQQQ DSLESWTPVA DLSLMSLKKP EGLSVRESKN SLQVLVNDND 300
  301 GERLYQGELS WSPKPVNNAK PLPTVMAASQ SQPVGRQGDA ADDPAIWVHP KNPALSRVLG 360
  361 TNKKQGLLAY DLTGKQLQEL PVGRLNNVDL RPGFMLGKKT VDLAVASNRD HNSLSLFSID 420
  421 RVSGVIREAG EIPTPLAEIY GVCLFKPASG ELYAFANGKD GSFLQYRLSA SDGKAKGELV 480
  481 RRFKVDTQPE GCVADDQRQR LFLGEEDVGV WEVDARADQP ATLSSVIKVG EAVHADVEGL 540
  541 ALYQSDKHDY LVISSQGNDS YVVVDAEPPY ALRGAFRVGL NANAGIDGTS ETDGIEVTSM 600
  601 NLGGPWSKGM LVVQDGRKRM PEQAQNFKFV PWAEVMKTLK LP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle