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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71556873, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFRIQIKPS ARLSVEHSCR IQRARVGALF SGESRMTRSR KIFAWTGATL LVVLAILVIV  60
   61 LVTFDWNRIK PTLNEKVSEA LHRPFAINGD LDVRWTREPE LGGWRAWVPS PHFVADDLTL 120
  121 GNPEWSKTPQ MVTLKHVEFR LSLLPLLAQQ VVIPRIDLTG PEAKLERLAD GRANWVFDLP 180
  181 KSDPNAEPSK WVVDIGAIKF DKGLVSFNDQ TLNANLDVVI DLLGKPIPFS EIVGSKEAQK 240
  241 AQEKGAVPQD YAFGLAVTGQ YHGQKLSGTG KVGGLLALKD ASQPFPVQAD VKVGDTHAVI 300
  301 AGTLTDPQNL GALDLRLKLS GASLSNLYPL TGVTLPDSPA YSTDGRLIAK LHDPAGANFR 360
  361 YEGFNGKIGN SDIHGDLGYV ASQPRPKLSG VLVSNQLLFS DLAPLIGADS NAAQKKRGGE 420
  421 SKQPSGKVLP VEEFQTDRWR AMDADVEFTG KRIVQSPDLP FTDLYTHLIL NDGQLSLEPL 480
  481 RFGVAGGKLD ADIRLDGRNK PLQGRAKLSA RNFKLKQLFP TFEPMKTSFG ELNGDADISG 540
  541 RGNSIAALLG TANGEMKMLV NDGAISRGLM EIAGLNVGNY VVGKLFGDKD VKINCAASDF 600
  601 GIKDGLATSR LFVFDTENAI IYINGTANMK TEQLDLQINP ESKGFRVFSL RSPLYVNGPF 660
  661 AKPNAGVQSG PLLLRGAGMV LLGATVGPVA GLLALVATGD SAPNQCGPLL EQMRTGKAPK 720
  721 TVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle