YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|71733910, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.62
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRHAGFTLIE LLIVVALIGI LANVATPSFK QLIESSRGLA AAQELASGIR SARVAAITRN  60
   61 QIVTIHAIEG DWSNGWRIIL DLDGKGPDEN DTLLVERANG GMTRVVGNQK VTERLSFNGL 120
  121 GNLRNRTNGT LHVCLNDQPV SSYRVIVAPT GRVRIEDTKR DVALCR

Type	Start	End	Confidence
Cytoplasmic	1	6	0.49
Transmembrane Helix	7	26	0.59
Non-Cytoplasmic	27	166	0.91