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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71733370, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRILSIIGV SLCIAMLSPV LQAANLKTLD VAALPGDRIE LKLAFDSPVP APRGYTTAQP  60
   61 ARIALDLPGV TSQLATKSRE LGNGNARSVV VVQAQDRTRV IINLTMLSPY SSRVDGNNLY 120
  121 VVIGQGAAAA QASQPTTAMG AQRVAVPPPT PASARPFIPA GVKAIRNVDF QRGELGEGNV 180
  181 IIDLSNPGIA PDIQEQGGKI RVDFAKTQLP EPLRVRLDVK DFATPVQFVS ASATGDKASI 240
  241 LIEPSGAFDY SAFQTENKLT ISVRPLTNED LDRRAADKPV YTGEKLSLNF QDIDVRSVLQ 300
  301 LIADFTNLNL VASDTVQGGI TLRLQNVPWD QALDLVLKTK GLDKRKVGSV LLVAPADEIA 360
  361 ARERQELESL KQIAELAPLR RELLQVNYAK AADIAKLFQS VTSAESKTDE RGSITVDDRT 420
  421 NNIIAYQTQD RLDELRRIVS QLDIPVRQVM IEARIVEANV DYNKQLGVRW GGSTNTSGNG 480
  481 KWTTYGLDNN GDEAGNTGSN VTSNVPFVDM GASGATSGIG LGFVTNNTLL DLELSAMEKT 540
  541 GNGEIVSQPK VVTSDKETAK ILKGTEIPYQ ESSSSGATTV SFKEASLSLE VTPQITPDNR 600
  601 IIMEVKVTKD EPDYLNAVLG VPPIKKNEVN AKVLISDGET IVIGGVFSNT QSKVVDKVPF 660
  661 LGDVPYLGRL FRRDVVSESK SELLVFLTPR IMNNQAISVS R

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle