YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLMU_NITWN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRNCLTIV LAAGEGTRMR SSLPKVLHPV GGQTLLSHVL AAAPGGPGTS LTVVIGPGHQ  60
   61 AVADEAKRVR PDVMTFVQDE RLGTAHAVLA AKEAIIRGAD DLLIAFGDTP LISADTFARM 120
  121 RAPLRAGASL AVLGFHARDP AGYGRLIVTD GRLTAIREDA DASPEERRMT LCNAGVMAFD 180
  181 GRTALRIIEK IGNANSKGEY YLTDAVGLVA ELGLTAAVIE TGEDEVRGIN TKAQLAEAEQ 240
  241 VMQARLRKAA LDAGVTMVAP ETVFLSADTS FGRDVTIEPY VIIGQGVTIA DGAVVHAFSH 300
  301 LVQASIGRNA SVGPYARLRP GTSVGDGARI GNFVETKAAV LEAGAKVNHL TYIGDAHVGA 360
  361 KANIGAGTIT CNYDGFNKHR TEIGEGAFVG SNSSLVAPLR IGAGAYIGSG SVVTKNVPDD 420
  421 ALAVGRGQQT LREGWAKRFR EMKLLARKQK TG

Type	Start	End	Confidence
Signal Peptide	1	16	0.56
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	452	0.98