YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74419370, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTATQAPRRN VDNQRMNTAR IVVLTIAVGA GGLAAYLASG SDKETQPVQT EQLRTVDVLV  60
   61 AKSDIPLGQA VTANDVAWQT WPADSASHSF IRRDQRPDAT TQLAGSIARS PFIAGEPIRE 120
  121 LKLVSAKGSG FMAAILPTGM RAISTEISPE TGAGGFILPN DRVDVILSKR EKNADHASGD 180
  181 SVNSETVLGN VRVLAIDQTI EEKNGQKVVV GRTATLELKP EQAETLARSR QMGTLSLALR 240
  241 SLADANAPEG DINDRRRDSI NVVRYGVPTQ TSVQR

Type	Start	End	Confidence
Cytoplasmic	1	20	0.85
Transmembrane Helix	21	40	0.89
Non-Cytoplasmic	41	275	0.99