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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|71051804, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKGPVPSSP SASSTSPGVS AAGGLQAQPE KPQHYTYTYT HIPPSRLIST YTRTEHSFPL  60
   61 YLKEFRTEQC PLFVQHKCTQ HRPYTCFHWH FVNQRRRRSV RRRDGTFNYS PDIYCTKYDE 120
  121 TTGICPDSDE CPFLHRTTGD TERRYHLRYY KTGICIHETD SKGHCTKNGQ HCAFAHGPHD 180
  181 LRSPVYDIRE LQAMEALQNG QPTLDGGMEG QTAMAASHAM IEKILGEEPR WQDTTYVLGH 240
  241 YKTEQCKKPP RLCRQGYACP YYHNSKDRRR SPRQNKYRSS PCPNVKHGDE WGDPSKCESG 300
  301 DSCQYCHTRT EQQFHPEIYK STKCNDMQQS GSCPRGPFCA FAHVEQSLVC DDLQSPSVVS 360
  361 SPTQTAPIMY MPSAAGDSVP VSPSSPHAPD FSNVWGKMSH LPTSPTSATM LCASLGSPTN 420
  421 PCGSPPGSLG KPHSLDNLGF HTDLPGSYKK APGCEREDSV GADYLKSFKS QAKLKTHSLE 480
  481 HRNPEQPLLQ SKQEVLGMLP MGSPLTSSIS SSITSSLAAT PPSPAAISGT PGMNANALPF 540
  541 YPTSDTVESV IESALDDLDL NEFGVAALEK TFDSSSVPAA GGIMIGGSLM QSSAPVNIPG 600
  601 SLGSSASFHS TSPSPPVSLS SHFLHQTTGP HSQSDNAFLS TSATHGSLGL NGMNNSIWEH 660
  661 FVSGSYSPGT SPGFLSGPGG AELIRLRHEL EEASSTIKQW EDSWKQAKQA CDAWKKEAEE 720
  721 ANERATAASM ECELAREQRD ALELQLKKLQ EELERVPGGQ DSKMYGSMSE LEGLPLATLF 780
  781 TIQKQLHANL ERVDKVRQRG SLPAQINKMS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle