YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74039299
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHYDELLKTE TQTFPMFWDS HLMNNPVVSA VMMAKALSST FERTATQLVK DQNVLNNLKS  60
   61 KKFDVMISET FELTGMYVAH LINVPCIPIW SAVRFLVFNK AFGQPSTLGY IPLEGSKMAP 120
  121 DFGFFDRLND VYRDFFGQIG MDRLGQYQNN IIEKAVGHSV PYWKDLVSQS PIYITNSNPY 180
  181 LDFAVATTPA IVHIGGITID LEKIKHADEL PEEYEKILQE RESTVLISFG SVIRSYEMPD 240
  241 NFKAGLIKMF ESLPDVTFIW KYERDDVEFQ KRLPKNVHLK KWVPQPSLLA DKRVKLFVTH 300
  301 GGLGSTMEVA YTGKPALSVP IFGDQPENAD MLARHGGAIA YDKFDLANGE KLTKTVREMV 360
  361 TNPKFSKNAE ALRDVLLKQP IDPKMNLMKH LEFAMEFPNH RSQVPAINKL GWIAHYYLDV 420
  421 IAFLTLVVVG FLYLIFRFTK IVFVRIGILN KKAKTE

Type	Start	End	Confidence
Non-Cytoplasmic	1	412	0.85
Transmembrane Helix	413	436	0.90
Cytoplasmic	437	456	0.84