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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|63054104
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTTVPVSVGG GNFPVGGLSP LSEAIWREKA PTEFVGDVSA RLTWQDLTVM VTMGDGETQN  60
   61 VLEGLTGYAE PGSLTALMGP SGSGKSTMLD ALASRLAANA FLSGTVLLNG RKTKLSFGTA 120
  121 AYVTQDDNLI GTLTVRETIW YSARVRLPDK MLRSEKRALV ERTIIEMGLQ DCADTVIGNW 180
  181 HLRGISGGEK RRVSIALEIL MRPRLLFLDE PTSGLDSASA FFVTQTLRAL SRDGRTVIAS 240
  241 IHQPSSEVFE LFDRLYLLSG GKTVYFGQAS DAYEFFAQAG FPCPALRNPS DHFLRCINSD 300
  301 FDKVRATLKG SMKLRFEASD DPLEKITTAE AIRVLVDYYH TSDYYYTAKA KVEEISQFKG 360
  361 TILDSGGSQA SFLLQTYTLT KRSFINMSRD FGYYWLRLLI YILVTVCIGT IYLNVGTSYS 420
  421 AILARGSCAS FVFGFVTFMS IGGFPSFVED MKVFQRERLN GHYGVAAFVI ANTLSATPFL 480
  481 IMITFISGTI CYFMVGLHPG FTHYLFFVLC LYASVTVVES LMMAIASIVP NFLMGIIIGA 540
  541 GIQGIFMLVS GFFRLPNDIP KPFWRYPMSY ISFHFWALQG QYQNDLRGLM FDSQGSAFKI 600
  601 PGEYVLENVF QIDLHRSKWI NLSVILSMII IYRIIFFIMI KTNEDVTPWV RGYIARRRMK 660
  661 QKNGTQNTTV APDGLTQSPS LRNYIAT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle