YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74009232
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCGHWEVPG LGMQQAPPHG PLLLEERSHS QEAARGRGAL RGSRWRPVPA SSGSGQSAVR  60
   61 LRLAPLGSEP TRSQGPPARF SFDELRFLPL KRPPMKECQN ASLKLLSRIE AMAILFAVVA 120
  121 RGTTILAKHA WCGGNFLEVT EQILAKIPSE NNKLTYSHGN YLFHYICQDR IVYLCITDDD 180
  181 FERSRAFNFL NEIKKRFQTT YGSRAQTALP YAMNSEFSSV LAAQLKHHSE NKGIDKVVET 240
  241 QAQVDELKGI MVRNIDLVAQ RGERLELLID KTENLVDSSV TFKTTSRNLA RAMCMKNLKL 300
  301 TIIIIIVSIV FIYIIVSPLC GGFTWPSCVK K

Type	Start	End	Confidence
Cytoplasmic	1	296	0.89
Transmembrane Helix	297	317	0.89
Non-Cytoplasmic	318	331	0.75