YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74009101
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRGKSRLNV EWLGYSPGLL LERRQLLAGR TPRSPAGTSG VARLYRSPAE RTECGPEPSP  60
   61 PPSPCCGRGC TMERLDKAAL NALQPPDFRN ESSLASTLKT LLFFTALMIT VPIGLYFTTK 120
  121 SYVFEGAFGM SNRDSYFYAA IVAVVAVHVV LALFVYVAWN EGSRQWREGK QD

Type	Start	End	Confidence
Cytoplasmic	1	97	0.98
Transmembrane Helix	98	118	0.92
Non-Cytoplasmic	119	135	0.91
Transmembrane Helix	136	159	0.93
Cytoplasmic	160	172	0.96