YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74008940
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALQTKTGGE VREEFGKAGR SLADHGQELD LDPQSHGGPQ KVFKQCKTSM TILVAVDNVG  60
   61 LVAKPQATKC SPWSERGAFS LAAWALGSWK PPPSSQPPGK SSPLSPEPPA EASLAALPPR 120
  121 QEREAAGEEA ASERGSWPAC GAAPEPRELR ARPHARTTRG SRLSSPRGAR PGLQRPPRSS 180
  181 MNLRRCVQAL LLLWLSLTAA CGGPLLQPSD GKALEEGNIR HLVQPRGSRN GPGPWQGGRK 240
  241 KFRRQRPRLS HKGPMPF

Type	Start	End	Confidence
Cytoplasmic	1	185	0.54
Transmembrane Helix	186	206	0.55
Non-Cytoplasmic	207	257	0.94