YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74008850, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.76
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLHVKWPFP AVPPFTWTLA SSVVMGLVGT YSCFWTKYMN HLTVHNKEVL YELIENRGPA  60
   61 TPLITVSNHQ SCMDDPHLWG ILKLRHIWNL KLMRWTPAAA DICFTKELHS RFFSLGKCVP 120
  121 VCRGDGVYQK GMDFILDKLN HGDWVHIFPE GKVNMSSEFL RFKWGIGRLI AECHLNPVIL 180
  181 PLWHVGMNDV LPNSPPYFPR FGQKITVLIG RPFSALPVLE RLRAENKSAV EMRKALTDFI 240
  241 QEEFQRLKVQ AEQLHNHLQP GS

Type	Start	End	Confidence
Non-Cytoplasmic	1	14	0.66
Transmembrane Helix	15	35	0.71
Cytoplasmic	36	262	0.59