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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74007805
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSMSVDSV TISVEGITCD SCVWTIEQQI GNLNGVYHIK VSLEEKNATI IYDPKLQTPK  60
   61 TLLEAIDDMG FDAVLHNPNP LPVLTDTVFL TVAGSLALPW DHIQNTLLKT KGVTDIKISP 120
  121 QQRTIVVTLI PSIVNANQII ELLPDLSLDI RTLEKKSGTC EDYSMAQAGE VMLKMKIEGM 180
  181 TCHSCTSTIE GKIGKLQGVQ RIKVSLDNQE ATIGYQPHLI TIEEIKKQIE AVGFPAFIKK 240
  241 QPKYLKLGAI DIERLKNTPV KSSEGSQQRS PSYTSDSTVT FIIDGMHCKS CVLNIESALS 300
  301 TLQYVSSIVV SLENRSAIVK YNASLVTPET LRKAIEAISP GQYRVSIASE VESTSNSPSS 360
  361 SPLQKIPLNI VSHPLTQETV INIDGMTCNS CVQSIEGVIS KKEGVKSIRV SLANGNGTVE 420
  421 YDPLLTSPET LREAIEDMGF DAALSDINEP LVIIGQTSSE MPLLTSTNEF YTKMMTPIHD 480
  481 VETKTSSKCY IQVTGMTCAS CVANIERNLR REEGIYSVLV ALMAGKAEVR YNPVVIQPPM 540
  541 IAEFIRELGF GATMIENADE VDGVLELVVR GMTCASCVHK IESILTKHRG IFYCSVALAT 600
  601 NKAHIKYDPE IIGPRDIIHM VESLGFEASL VKKDRSASHL DHKREIRQWR RSFLVSLFFC 660
  661 IPVMGLMIYM MVMDHHLAIL HHNQNMSQEE MINIHSSMFL ERQILPGLSI MNLLSFLLCV 720
  721 PVQFFGGWYF YIQAYKALKH KTANMDVLIV LATTIAFAYS LVILLVAMYE RAKVNPITFF 780
  781 DTPPMLFVFI ALGRWLEHIA KGKTSEALAK LISLQATEAT IVTLDSDNIL LSEEQVDVEL 840
  841 VQRGDIIKVV PGGKFPVDGR VIEGHSMVDE SLITGEAMPV AKKSGSTVIA GSINQNGSLL 900
  901 IRATHVGAET TLSQIVKLVE EAQTSKAPIQ QFADKLSGYF VPFIVIISIA TLLVWIIIGF 960
  961 LNFEIVETYF PGYNRSISRT ETIIRFAFQA SITVLCIACP CSLGLATPTA VMVGTGVGAQ1020
 1021 NGILIKGGEP LEMAHKVKVV VFDKTGTITH GTPVVNQVKI LVESNRISRN KILAIVGTAE1080
 1081 SNSEHPLGAA ITKYCKQELD TETLGTCIDF QVVPGCGISC KVINIEGLLH KDNWKIEENN1140
 1141 IKNASLVQIG ANNEQSSTSS SMIIDAQLSN TLNAQQYRVL IGNREWMIRN GLVINNDVDD1200
 1201 SMTEHERKGR TAVLVAVDDE LCGLIAIADT VKPEAELAVH ILKSMGLEVV LMTGDNSRTA1260
 1261 RSIASQVGIT KVFAEVLPSH KVAKVKQLQE EGKWVAMVGD GINDSPALAM ANVGIAIGTG1320
 1321 TDVALEAADV VLIRNDLLDV VASIDLSRKT VKRIRINFVF ALIYNLVGIP IAAGVFMPIG1380
 1381 LVLQPWMGSA AMAASSVSVV LSSLFLKLYR KPTYENYELH ARSQMGQKRP SEISVHVGID1440
 1441 DTSRNSPKLG LLDRIVNYSR ASINSLLSDK RSLNSIGTSE PDKHSLLVGD YREDDDTTL

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