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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74007803
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSMSVDSV TISVEGITCD SCVWTIEQQI GNLNGVYHIK VSLEEKNATI IYDPKLQTPK  60
   61 TLLEAIDDMG FDAVLHNPNP LPVLTDTVFL TVAGSLALPW DHIQNTLLKT KGVTDIKISP 120
  121 QQRTIVVTLI PSIVNANQII ELLPDLSLDI RTLEKKSGTC EDYSMAQAGE VMLKMKIEGM 180
  181 TCHSCTSTIE GKIGKLQGVQ RIKVSLDNQE ATIGYQPHLI TIEEIKKQIE AVGFPAFIKK 240
  241 QPKYLKLGAI DIERLKNTPV KSSEGSQQRS PSYTSDSTVT FIIDGMHCKS CVLNIESALS 300
  301 TLQYVSSIVV SLENRSAIVK YNASLVTPET LRKAIEAISP GQYRVSIASE VESTSNSPSS 360
  361 SPLQKIPLNI VSHPLTQETV INIDGMTCNS CVQSIEGVIS KKEGVKSIRV SLANGNGTVE 420
  421 YDPLLTSPET LREAIEDMGF DAALIFPCPP DINEPLVIIG QTSSEMPLLT STNEFYTKMM 480
  481 TPIHDVETKT SSKCYIQVTG MTCASCVANI ERNLRREEGI YSVLVALMAG KAEVRYNPVV 540
  541 IQPPMIAEFI RELGFGATMI ENADEVDGVL ELVVRGMTCA SCVHKIESIL TKHRGIFYCS 600
  601 VALATNKAHI KYDPEIIGPR DIIHMVESLG FEASLVKKDR SASHLDHKRE IRQWRRSFLV 660
  661 SLFFCIPVMG LMIYMMVMDH HLAILHHNQN MSQEEMINIH SSMFLERQIL PGLSIMNLLS 720
  721 FLLCVPVQFF GGWYFYIQAY KALKHKTANM DVLIVLATTI AFAYSLVILL VAMYERAKVN 780
  781 PITFFDTPPM LFVFIALGRW LEHIAKGKTS EALAKLISLQ ATEATIVTLD SDNILLSEEQ 840
  841 VDVELVQRGD IIKVVPGGKF PVDGRVIEGH SMVDESLITG EAMPVAKKSG STVIAGSINQ 900
  901 NGSLLIRATH VGAETTLSQI VKLVEEAQTS KAPIQQFADK LSGYFVPFIV IISIATLLVW 960
  961 IIIGFLNFEI VETYFPGYNR SISRTETIIR FAFQASITVL CIACPCSLGL ATPTAVMVGT1020
 1021 GVGAQNGILI KGGEPLEMAH KVKVVVFDKT GTITHGTPVV NQVKILVESN RISRNKILAI1080
 1081 VGTAESNSEH PLGAAITKYC KQELDTETLG TCIDFQVVPG CGISCKVINI EGLLHKDNWK1140
 1141 IEENNIKNAS LVQIGANNEQ SSTSSSMIID AQLSNTLNAQ QYRVLIGNRE WMIRNGLVIN1200
 1201 NDVDDSMTEH ERKGRTAVLV AVDDELCGLI AIADTVKPEA ELAVHILKSM GLEVVLMTGD1260
 1261 NSRTARSIAS QVGITKVFAE VLPSHKVAKV KQLQEEGKWV AMVGDGINDS PALAMANVGI1320
 1321 AIGTGTDVAL EAADVVLIRN DLLDVVASID LSRKTVKRIR INFVFALIYN LVGIPIAAGV1380
 1381 FMPIGLVLQP WMGSAAMAAS SVSVVLSSLF LKLYRKPTYE NYELHARSQM GQKRPSEISV1440
 1441 HVGIDDTSRN SPKLGLLDRI VNYSRASINS LLSDKRSLNS IGTSEPDKHS LLVGDYREDD1500
 1501 DTTL

YRC Informatics Platform - Version 3.0
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