YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74007524
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAAESSGD PGTTTPRPLF AGLSDISISQ DIPVEGEITI PMRSQIQEFD SSTLNESVQN  60
   61 TIMRDLKAVG KKFMHVLYPR KSNTLLRDWD LWGPLILCVT LALMLQRSSV DSEKDGGPQF 120
  121 AEVFVIVWFG AVTITLNSKL LGGNISFFQS LCVLGYCILP LTVAMLVCRL VLLAEPGPVN 180
  181 FMVRLFVVIV MFAWSIVAST AFLADSQPPN RKALAIYPVF LFYFVISWMI LTFTPQ

Type	Start	End	Confidence
Cytoplasmic	1	88	0.95
Transmembrane Helix	89	108	0.87
Non-Cytoplasmic	109	119	0.78
Transmembrane Helix	120	141	0.84
Cytoplasmic	142	151	0.69
Transmembrane Helix	152	173	0.93
Non-Cytoplasmic	174	180	0.85
Transmembrane Helix	181	204	0.91
Cytoplasmic	205	212	0.88
Transmembrane Helix	213	233	0.93
Non-Cytoplasmic	234	236	0.76