YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74006138
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALRALRSL RGAAAQALRS GAGGRLPLQP SRGARQWQPD VEWAEQFGGA VMYPTKETAH  60
   61 WKPPPWNDVD PPKDTMVTNL TLNFGPQHPA AHGVLRLVME LSGEMVRKCD PHIGLLHRGT 120
  121 EKLIEYKTYL QALPYFDRLD YVSMMCNEQA YSLAVEKLLN IQPPPRAQWI RVLFGEITRL 180
  181 LNHIMAVTTH ALDIGAMTPF FWMFEEREKM FEFYERVSGA RMHAAYVRPG GVHQDLPLGL 240
  241 MDDIYEFSKN FSLRVDELEE MLTNNRIWKN RTVDIGVVTA EDALNYGFSG VMLRGSGIQW 300
  301 DLRKTQPYDV YDQVDFDVPI GSRGDCYDRY LCRVEEMRQS LRIIEQCLNK MPPGEIKVDD 360
  361 AKVSPPKRAE MKTSMESLIH HFKLYTEGYQ VPPGATYTAI EAPKGEFGVY LVSDGSSRPY 420
  421 RCKIKAPGFA HLAGLDKMSK GHMLADVVAI IGTQDIVFGE VDR

Type	Start	End	Confidence
Signal Peptide	1	24	0.61
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	463	0.95