YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74005799
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFLCLSFRL LLPVSTPLGQ GRVNQLGGVF INGRPLPNHI RHKIVEMAHH GIRPCVISRQ  60
   61 LRVSHGCVSK ILCRYQETGS IRPGAIGGSK PKVTTPDVEK KIEEYKRENP GMFSWEIRDK 120
  121 LLKDAVCDRN TVPSVSSISR ILRSKFGKGE EEEADLERKE AEESEKKAKH SIDGILSERA 180
  181 SAPQSDEGSD IDSEPDLPLK RKQRRSRTTF TAEQLEELER AFERTHYPDI YTREELAQRA 240
  241 KLTEARVQVW FSNRRARWRK QAGANQLMAF NHLIPGGFPP TAMPTLPTYQ LSETSYQPTA 300
  301 IPQAVSDPSS TVHRPQPLPP STVHQSTIPS NPDSSSAYCL PSTRHGFSSY TDSFVPPSGP 360
  361 SNPMNPAIGN GLSPQVMGLL ANHGGVPHQP QTDYALSPLT GGLEPATTVS ASCSQRLDHM 420
  421 KSLDSLPTSQ SYCPPTYSST GYSMDPVPGY QYGQYGQSAF HYLKPDIA

Type	Start	End	Confidence
Signal Peptide	1	21	0.92
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	468	0.99