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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74005797
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKIGKSSIM PVTYITPNNS PKPRDVTPAG QIHSVTGSDS QSPTRMPVPP DVAEAHKLGQ  60
   61 HNHAVARGSE QITLLDSRSV QGELGWIASP LEGGWEEVSI MDEKNTPIRT YQVCNVMEPS 120
  121 QNNWLRTDWI TREGAQRVYI EIKFTLRDCN SLPGVMGTCK ETFNLYYYES DNDKERFIRE 180
  181 SQFAKIDTIA ADESFTQVDI GDRIMKLNTE IRDVGPLSKK GFYLAFQDVG ACIALVSVRV 240
  241 FYKKCPLTVR NLAQFPDTIT GADTSSLVEV RGSCVNNSEE KDVPKMYCGA DGEWLVPIGN 300
  301 CLCNAGHEER NGECQACKIG YYKALSTDAA CAKCPPHSYS VWEGATSCTC DRGFFRADND 360
  361 AASMPCTRPP SAPLNLISNV NETSVNLEWS SPQNTGGRQD ISYNVVCKKC GAGDSSKCRP 420
  421 CGSGVHYTPQ QNGLKTTKVS ITDLLAHTNY TFEIWAVNGV SKYNPSPDQS VSVTVTTNQA 480
  481 APSSIALVQA KEVTRYSVAL AWLEPDRPNG VILEYEVKYY EKDQNERSYR IVRTAARNTD 540
  541 IKGLNPLTSY VFHVRARTAA GYGDFSEPLE VTTNTVPSRI IGDGANSTVL LVSVSGSVVL 600
  601 VVILIAAFVI SRRRSKYSKA KQEADEEKHL NQGVRTYVDP FTYEDPNQAV REFAKEIDAS 660
  661 CIKIEKVIGV GEFGEVCSGR LKVPGKREIC VAIKTLKAGY TDKQRRDFLS EASIMGQFDH 720
  721 PNIIHLEGVV TKCKPVMIIT EYMENGSLDA FLRKNDGRFT VIQLVGMLRG IGSGMKYLSD 780
  781 MSYVHRDLAA RNILVNSNLV CKVSDFGMSR VLEDDPEAAY TTRGGKIPIR WTAPEAIAYR 840
  841 KFTSASDVWS YGIVMWEVMS YGERPYWDMS NQDVIKAIEE GYRLPPPMDC PIALHQLMLD 900
  901 CWQKERSDRP KFGQIVNMLD KLIRNPNSLK RTGTESSRPN TALLDPSSPE FSAVVSVGDW 960
  961 LQAIKMDRYK DNFTAAGYTT LEAVVHMNQE DLARIGITAV THQNKILSSV QAMRTQMQQI1020
 1021 HGRMVPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle