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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74005769
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGSSDCCLA PPRELWAASR CSPRGWRGDR RPAPEAVSCR IACWDPAPTL RPTPRPPGPL  60
   61 RAWNAALPGL TAEGVGTVYS LITLNKKGTL TGLVASRGWD PGKERSGVRA SSLLVGARPG 120
  121 GGKVGRRRHS DTPGGPASRT TSQRRAAEVK VSGRTCGQIS RSEHVTGPAP PLYFAFSACT 180
  181 LSPRPAPSAR LANGGPAGER GRAHVCPCAR PPRLGAPRVH DPGPRGLRAP PRAAGPGFRP 240
  241 RSPRSPRGAR SPGRRPRIAM VTVGNYCEAE GPAGPAWVKG GLSPCFFYTL VPSILMGLGA 300
  301 LALVLALPCK RRERPTGAHE RSWTAGPLVA PYVLQLLLAT LQVALPLASL VGRVGTAGGA 360
  361 PLPGYLLLAS ILGTLASACG LGLLVVEHNQ AWQKLAMGIW IEFRHSAGLL LLWTVAFTAE 420
  421 NLALVSWNSP QWWWARADLG QQVQFSLWVL RYVVSGGLFI LGLWAPGLRP QSYALKVNEE 480
  481 DQDVERSETT EAPPRSTWRD LGRKLRLLSG YLWPRGSPVL QLVVLICLGL MGLERGLNVL 540
  541 VPIFYRNIVN SLTEKAPWNS LAWIVTTYVA LKFLQGGGTG STGFVSNLRT FLWIRVQQFT 600
  601 SRQVELRLFS HLHELSLRWH LGRRTGEVLR IVDRGTSSVT GLLSYLVFNI IPTLADITIG 660
  661 IIYFSMFFNA WFGLIVFLCM SLYLIMTIVV TEWRTKFRRA MNTQENATRA RAVDSLLNFE 720
  721 TVKYYNAEGY EVNCYREAIT KYQDLEWKSS ASLVLLNQTQ NLVIGLGLLA GSLLCAYFVS 780
  781 EQKLQVGDFV LFGTYIIQLY MPLNWFGTYY RMIQTNFIDM ENMFDLLKEK PEVKDLPGAG 840
  841 PLRFQRGQIE FENVHFSYAN GRETLQDVSF TVMPGQTVAL VGPSGAGKST VLRLLFRFYD 900
  901 ISSGCIRIDG QDISQVTQIS LRSHIGVVPQ DTVLFNDTIA NNIRYGCITA GDEEVMAAAQ 960
  961 AAGIHEAIMS FPEGYETQVG ERGLKLSGGE KQRVAIARTI LKAPDIILLD EATSALDTSN1020
 1021 ERAIQASLAK VCANRTTIVV AHRLSTVVDA DQILVFKDGW IVERGRHEAL LSRGGMYADM1080
 1081 WQLQQRGQEE VSEDTKPLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle