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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74004606
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAGRLWLL YLSAGLLPRL GAAFNLDTRE DHVIRKAGEP GSLFGFSLAM HRQLQPEDRR  60
   61 LLLVGAPRAV ALPLQRANRT GGLYSCDITS PGPCTRIEFD NDADPSSESK EDQWMGVTVQ 120
  121 SQGPGGKVVT CAHRYEKRQH VNTKQESRDI FGRCYVLSQN LRIEDDMDGG DWSFCDGRLR 180
  181 GHEKFGSCQQ GVAATFTKDF HYIVFGAPGT YNWKGIVRVE QKNNTFFDMN IFEDGPYEVG 240
  241 GETDHDESLV PVPANSYLGF SLDSGKGIVS KDEITFVSGA PRANHSGAVV LLKRDMKSAH 300
  301 LLPEYIFDGE GLASSFGYDV AVADLNKDGW QDIVIGAPQY FDRDGEVGGA VYVYINQQGR 360
  361 WNNVKPIRLN GTKDSMFGIA VKNIGDINQD GYPDIAVGAP YDDMGKVFIY HGSPNGINTK 420
  421 PTQILEGKSP YFGYSIAGNM DLDRNSYPDV AVGSLSDSVT VFRSRPVINI QKTVTITPDT 480
  481 IDLRQKTLCG APSGICLKVK ACFEYTAKPT GYNPSISILG TLEAEKERRK SGLSSRVQFR 540
  541 NQGSEPRYTQ ELTLNRQKQK ACMEETLWLQ ENIRDKLRPI PITASVEIQE PNTRRRVNSL 600
  601 PEILPILNSN EPKTVHRDVH FLKEGCGDDN ICNSNLKLEY KFCTREGSQD KFSYLPIQKG 660
  661 VPELVLKDQK DIALEITVTN SPSNPRDPTK DGDDAHEAKL VATFPDTLTY SAYRELRAFP 720
  721 EKQLSCVANQ NGSQVDCELG NPFKRNSSVT FYLILSTTEV TFDTTDLDIN LKLETTSNQD 780
  781 NLASITATAK VVIELLLSVS GVAKPSQVYF GGTVVGEQAM KSEDEVGSLI EYEFRVINLG 840
  841 KPLKNLGTAT LNIQWPKEIS NGKWLLYLVK VESKGLEKIA CEPRGEINFL KLKESHNSRR 900
  901 KREIAEKQIE DSRKFSLFAE RKYQTLNCST NVRCVNISCP LRGLDSKASV VLRSRLWNST 960
  961 FLEEYSKMNY LDILVRASID VAATAENIKL PNAGTQIRVT VFPSKTVAQY SGVPWWIILV1020
 1021 AILAGILMLA LLVFILWKCG FFKRNKKDHY DATYHKAEIH AQPSDKERLT SDA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle