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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74004356
Protein type: Globular with Signal Peptide
Type Confidence: 0.46
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESGERLPSS TASSTTPSSS LPSVASSVSK GGLSTGAASL SSTINPCGHL FRAAGDQPFN  60
   61 LSTVSSAFPM VSHPVFGLHS ASSGHSEFGG LGTLGTPTAL AAHPQLASFP EWWRTTDVHT 120
  121 RTGATFFPPL LGIPPLFAPP AQNHDSSSFH SRTSGKSNRN GPEKGVNGSI NGNSTSSVSG 180
  181 INTPVLSTTA SSSVGQTKSI SSGGGNRKCN QEQNKNQPLD ARADKIKDKK PRKKAMESSS 240
  241 NSDSDSGTSS DTSSEGISSS DSDDLEEDEE EEDQSIEESE DDDSDSESEA QHKSNNQVLL 300
  301 HGMSDPKADG QKATEKAQEK RIHQPLPLVS ESQTHSSFQS QQKQPQVLSQ QLPFIFQSSQ 360
  361 AKEESVNKHT SVIQSTGLVS NVKPLSLVNQ AKKETYMKLI VPSPDVLKAG NKNTSEESSP 420
  421 LTSEMRSKRE QYKQTFPAQL KKQESSKSLK KVIAALSNPK TTSSSPAHPK QTVENNHPNP 480
  481 FLTNALLGNH QPNGVIQSVI QEAPLALTTK TKMQSKINEN IATASSTPFS SPVNLSTSGR 540
  541 RTPGNQTTVI PSASPILHTQ GKEKVVSNNV NTVKTQHHPH PAKSLVEQFR GTDSDIPSSK 600
  601 DSEDSNEDEE EDDEEEDEED DEDDESDDSQ SESDSNSESD TEGSEEDDDD DKDQDESDSD 660
  661 TEGEKTSMKL NKTTSSVKSP SMSLTAHSTP RNLHIAKAPG SAPAALCSES QSPAFLGTPS 720
  721 STLTSSPHSG TSKRRRVTDE RELRIPLEYG WQRETRIRNF GGRLQGEVAY YAPCGKKLRQ 780
  781 YPEVIKYLSR NGIMDISRDN FSFSAKIRVG DFYEARDGPQ GMQWCLLKEE DVIPRIRAME 840
  841 GRRGRPPNPD RQRAREESRM RRRKGRPPNV GSAEFLDNTD AKLLRKLQAQ EIARQAAQIK 900
  901 LLRKLQKQEQ ARVAKEAKKQ QAIMAAEEKR KQKEQIKIMK QQEKIKRIQQ IRMEKELRAQ 960
  961 QILEAKKKKK EEAANAKLLE AEKRIKEKEM RRQQAVLLKH QELERHRLDM VWERERRRQH1020
 1021 MMLMKAMEAR KKAEEKERLK QEKRDEKRLN KERKLEQRRL ELEMAKELKK PNEDMCLADQ1080
 1081 KPLPELPRIP GLVLSGSTFS DCLMVVQFLR NFGKVLGFDV NIDVPNLSVL QEGLLNIGDS1140
 1141 MGEVQDLLVR LLSAAVCDPG LITGYKAKTA LGEHLLNVGV NRDNVSEILQ IFMEAHCGQT1200
 1201 ELTESLKTKA FQAHTPAQKA SVLAFLINEL ACSKSVVSEI DKNIDYMSNL RRDKWVVEGK1260
 1261 LRKLRIIHAK KTGKRDTSGG IDLGEEQHPL GTPTPGRKRR RKGGDSDFDD DDDDDSDDQA1320
 1321 DEDDEDEEDK EDKKGKKTDI CEDEDEGDQA ASVEELEKQI EKLSKQQSQY RRKLFDASHS1380
 1381 LRSMMFGQDR YRRRYWILPQ CGGIFVEGME SGEGLEEIAK EREKLKKAEC IQIKEEIFET1440
 1441 SEDTLNCSNP DHCEQKEDPK EKDNTNLFLQ KPGSFSKLSK LLEVAKMPPE SDVMAPKPNN1500
 1501 SANGCTLSYQ NSGKHSLGSI QSTATQSNME KTDSNNLFST SSGSPGKFYS PLPNDQLLKT1560
 1561 LTEKNRQWFS LLPRTPCDDT SLTHADVSSA SVVTPQSQPP STSPSPGPAP LLGSSAQNPV1620
 1621 GLNPFAVSPL QMKSGVSMMG LQFCGWPTGV LTSNIPFTSP LPGLGSGLGL SEGNGNSFLT1680
 1681 PNVASSKSES PVPQNEKVSS TQPAPVEVAK PVDFPSPKPI PEEMQFGWWR IIDPEDLKAL1740
 1741 LKVLHLRGIR EKALQKQIQK HLDYITQACI KNKDVAIIEL NENEENQVTR DIVENWSVEE1800
 1801 QAMEMDLSIL QQVEDLERRV ASASLQVKGW MCPEPASERE DLVYFEHKSF SKLCKEHDGE1860
 1861 FTGEEESSAH ALERKSDNPL DIAVTRLADL ERNIERRYLK SPLSTTIQIK LDNVGTVTVP1920
 1921 APAPSISGDG DGIEEDIAPG LRVWRRALSE ARSAAQVALC IQQLQKSIAW EKSIMKVYCQ1980
 1981 ICRKGDNEEL LLLCDGCDKG CHTYCHRPKI TTIPDGDWFC PACIAKASGQ TLKIKKLQVK2040
 2041 GKKTNESKKG KKVTLTGDTE DEDSASTNSS LKRGNKDLKK RKMEENTSVN LSKQESFTSV2100
 2101 KKPKRDDSKD LALCSMILTE METHEDAWPF LLPVNLKLVP GYKKVIKKPM DFSTIREKLS2160
 2161 SGQYPNLETF AVDVRLVFDN CETFNEDDSD IGRAGHSMRK YFEKKWTDIF KVS

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