YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74004132
Protein type:	Transmembrane
Type Confidence:	0.57
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQPGKTLNF EIPLPIIFIL IRHESKTNRS TVLWLPFQAG SLLLLLLLVS DLLLCQSVAS  60
   61 LPICPSGAVN CQVSLRDLFD RAVILSHYIH NLSSEMFNEF DKRYAQGRGF ITKAINSCHT 120
  121 SSLSTPEDKE QAQQIHHEDL LNLILRVLRS WNDPLYHLVT EVRGMQEAPD AILSRAIEIE 180
  181 EQNRRLLEGM EKIVGQVHPG IRENEVYSVW SGLPSLQMAD EDTRLFAFYN LLHCLRRDSH 240
  241 KIDNYLKLLK CRIVYDSNC

Type	Start	End	Confidence
Cytoplasmic	1	31	0.51
Transmembrane Helix	32	53	0.52
Non-Cytoplasmic	54	259	0.95