YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57110218
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKDSGPLVP IHWIGFGYAA LVASGGIIGY AKAGSVPSLA AGLFFGSLAG LGAYQLSQDP  60
   61 RNIWVFLATS GTLAGIMGMR FYHSGKFMPA GLIAGASLLM VAKLGISVLN KPHQ

Type	Start	End	Confidence
Cytoplasmic	1	8	0.88
Transmembrane Helix	9	30	0.91
Non-Cytoplasmic	31	35	0.71
Transmembrane Helix	36	56	0.89
Cytoplasmic	57	62	0.81
Transmembrane Helix	63	82	0.93
Non-Cytoplasmic	83	88	0.70
Transmembrane Helix	89	109	0.89
Cytoplasmic	110	114	0.82