YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74003783
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAMCYIFSN KFLLMEGMNT ELAKRIEFSS TVILSQVATV RGKKECFAFV HTLTRLQSED  60
   61 EKPRASESAE LNKPSHQQAK GQLSPPGLGA GTHGEATAQS STQNCYSPAE ASRDRRRLHK 120
  121 GFNLNEKSEL EPTRAAALGQ GGQWQPQDRS REQPQAAPGK LLRARSFRHS SRTSTIRKGA 180
  181 PGPTSSKMFI WTSGRTSSSY RHDEKRNIYQ KIRDHDLLDK RKTVTALKAG EDRAILLGLA 240
  241 MMVCSIMMYF LLGITLLRSY MQSVWTEESQ CTLLNATITD TFNCSFSCGP DCWKLSQYPC 300
  301 LQVHVNLTSS GERLLLYHTE ETMKVNQKCS YIPKCGKNFE ESMSLVNVVM ENFRKYQHFS 360
  361 CYSDPEGNQK SVILTKLYSS NVLFHSLFWP TCMMAGGVVI VALVKLTQYL SLLCERIQRI 420
  421 NR

Type	Start	End	Confidence
Cytoplasmic	1	234	0.91
Transmembrane Helix	235	256	0.92
Non-Cytoplasmic	257	386	0.92
Transmembrane Helix	387	407	0.90
Cytoplasmic	408	422	0.82