YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74003097
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPAEVSRLH ALAYLQCALG FLGSLLLRQA ASSYGRYASP GAAFGVPARA AWALQELPSL  60
   61 AVPLWVCART AAERLRRAPN RILLAMFLLH YAQRSLIFPF LIRGGKPMPL YTCVLAFTFC 120
  121 VYNGYLQSRY LSQYAVYADD WVTDPRFLVG FCLWLIGMLI NIHSDHILRN LRKPGETGYK 180
  181 IPRGGLFEYV TAANYFGEVV EWCGYGLASW SIQGGAFALF TFCILLTRAQ QHHRWYLEKF 240
  241 EDYPKFRKII IPFLF

Type	Start	End	Confidence
Cytoplasmic	1	10	0.86
Transmembrane Helix	11	31	0.89
Non-Cytoplasmic	32	49	0.81
Transmembrane Helix	50	68	0.84
Cytoplasmic	69	81	0.77
Transmembrane Helix	82	102	0.72
Non-Cytoplasmic	103	107	0.71
Transmembrane Helix	108	126	0.90
Cytoplasmic	127	146	0.67
Transmembrane Helix	147	164	0.93
Non-Cytoplasmic	165	205	0.75
Transmembrane Helix	206	227	0.88
Cytoplasmic	228	255	0.93