YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74002949
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAPAPGPGA ASGGAVGGAG AGAGAGAGGG GPGGRLPSRV LELVFSYLEL SELRSCALVC  60
   61 KHWYRCLHGD ENSEVWRSLC ARSLAEEALR TDILCNLPSY KAKVRAFQHA FSTNDCSRNV 120
  121 YIKKNGFTLH RNPIAQSTDG ARTKIGFSEG RHAWEVWWEG PLGTVAVIGI ATKRAPMQCQ 180
  181 GYVALLGSDD QSWGWNLVDN NLLHNGEVNG IVSTCTHAPK YQIGERIRVI LDMEDKTLAF 240
  241 ERGYEFLGVA FRGLPKVCLY PAVSAVYGNT EVTLDYLGKP LDG

Type	Start	End	Confidence
Signal Peptide	1	25	0.77
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	283	0.96