YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57109514
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGSSECFYV WIILAFLGLA LVVSLIFNIS HYVEKQRQDK MYSYSEDYIP REEEYYVEDT  60
   61 PIYGNLDDMV PEPVDENCYE QMKARPERCT NELQGATLPT QASEEAQVFY ASLDHNCEGK 120
  121 HRKTKKQNNY VLDKDEDEQL HAEDVSLSKT TLVNSFPLEN QEIEENVHDD PIRLFGLIRA 180
  181 KKESIN

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.53
Transmembrane Helix	7	31	0.87
Cytoplasmic	32	186	0.53