YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74002297
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLPHFKMK KYQGKVKEEN VLSTIVCSTK SHKMKSCTRS SSLELQVIGQ VELRTVNHSS  60
   61 GGPRRRPLLP AAGPRPRRPP ARPPPLPVWA QAREELRREA GGEWTLLARM VLESVARIVK 120
  121 VQLPAYLKRL PVPESITGFA RLTVSEWLRL LPFLGVLALL GYLAIRPFLP KKKQQKDSLI 180
  181 NLKIQKENPK VVNEINIEDL CLTKAAYCRC WRSKTFPACD GSHNKHNELT GDNVGPLILK 240
  241 KKEV

Type	Start	End	Confidence
Cytoplasmic	1	146	0.54
Transmembrane Helix	147	165	0.83
Non-Cytoplasmic	166	244	0.61