YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|57109118
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAERFLGKTL AAASLSVALA SVAVRPSGCG SAPACRNTFS FCGFHLNSNI MSNSNGAKQN  60
   61 SHNKARTSPY PGSKVQRSQV PNEKVGWFVE WQDYNPVEYT AVSVLAGPRW ADPQISESNF 120
  121 SPKFNEKDGH VQRKSQNGLY EIENGRPRNP AGRTGLVGRG LLGRWGPNHA ADPIITRWKR 180
  181 DRSGNKIPHP ISGKNILQFV AIKRKDCGEW AIPGGMVDPG EKISATLKRE FGEEALNSLQ 240
  241 KSGAEKRELE EQLHKLFSQE HLVIYKGYVD DPRNTDNAWM ETEAVNYHDE TGEIMDNLTL 300
  301 EAGDDAGKVK WVDISDQLQL YASHSQFIKL VAEKRDAHWS EDSETECSGL

Type	Start	End	Confidence
Signal Peptide	1	31	0.93
N-region	1	22
H-region	23	28
C-region	29	31
Cleavage Site	31	32
Non-Cytoplasmic	32	350	0.99