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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74001578
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEEAARAAE RSRRPDQRLA GRTGGRQGPQ DAAGRGRKER QPRATCRGPG GTEKPLPTPP  60
   61 RAPSWLPGQT PRGREQTQRP SPGGAPCPQP GGRVTRGVCS PVLHIDAPWA PRGWLWTPGP 120
  121 EGCTAGASMG GRGRGLSSKG SAQGLVRRGQ QPPAGFTRNQ DPTGDLSTAG AVGPVCTGAH 180
  181 QGVLLLLGGV GGLPASGSLS CCSRPLDAAE VEGCTRGADR GPGFGRQEQG PRREDSVRGS 240
  241 HRRAHPGPES AGRPRGHLAA GGPGSPGGSC LPQTHLGRRR RVSSGSGSEV EPLRLHTWLL 300
  301 RVNTQRRHSR SWGRFYDFSL GHSFRAADGD GPSLGSGGSG ADLVPVPGSS VFLCCPRSAT 360
  361 AGAARSQASG CVRWAEGGSR WPQAVRHSDQ QDLGVSGYRP EDNRRHVPRA AREEGAQDTL 420
  421 CPPRWRVEEK RPRLPSGKTP TATGTAGGHG PQTLTPALTP TPRGGDAAPR RPPHAPRSTL 480
  481 LALSPAARSG WGARAVRERV RTAGSGTWPV LPARLSVAPQ AVCPAPAVRL MQPSLRLAGA 540
  541 GYSGAVAPVP DSAGGPDHPG DRGRTAVAEP GPGLSSLLAS ASRQDSSARS RPTSGDRVLC 600
  601 GDQGPGQRQG LAHTSSCGPL HPGPRLEEAV RCLGRTEGTR PTPEIGTVHC SRLGQRSLPR 660
  661 VTNEITPVLS YCYLLVLVPV FLLTDYLRYK PVLVLQGLSY VAVWLLLLLG TSVRHMQCME 720
  721 LFYSVTMAAR IAYSSYVFSL VRPARYQRMA GYSRAAVLLG VFTSSVLGQL LVTLGRVSFS 780
  781 TLNYVSLGLL IFSLVLALFL KRPRRSLFFN RDGPARSGAS PSELDRMNPD APRGAARLGA 840
  841 WRDWTLVRML RELGDSLRQP QLRLWSLWWV FNSAAYYLIV YYAHILWNVV HTTTVYNGAA 900
  901 DAASTLLGAI TSFSAGFVKI RWALWAKLVI ASVTAVQAGL VFLMYSTNSI WLCYVAFVLF 960
  961 RGAYQFLVPI ATFQIASSLS KELCALVFGV NTFLATVLKT IITLIVSDKR GLGLPVHSQF1020
 1021 LIYFGYFLVL FVIYLLGAIL VIVQHIQEAR RAPPEPGSPA EKAIPMLSTQ SSGLSNLQPT1080
 1081 APPQTSPEQH PQPEAKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle