YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74001439
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTECPRQDV GQNREREFMR TPSNARRTRD ALYQGRPGTA TMHLPNWRGV RNRPVRAGDV  60
   61 HAGASVACFS LGVGAGSCGG CAPSKAMRLQ QTSVRRGSKS LMMIVFPSHR LSKATGKMVE 120
  121 NSPSPLPERA IYGFVLFLSS QFGFILYLVW AFIPESWLNS LGLTYWPQKY WAVALPVYLL 180
  181 IIILIGYVLL FGINMMSTSP LNSIHTITDN YAKNQQQKKY QEEAIPALRD IPISEVNQMF 240
  241 FLATKEHYAK N

Type	Start	End	Confidence
Cytoplasmic	1	130	0.73
Transmembrane Helix	131	153	0.92
Non-Cytoplasmic	154	171	0.86
Transmembrane Helix	172	193	0.93
Cytoplasmic	194	251	0.91