YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74001422
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQGTVLISS GFLKPGVWPE CRYVHLRDVR VVALTRSCVY KSQNRRMYVH VIVKASSSGT  60
   61 VNESYKPEFI ELKKWLKDRK FEDTNLIPAC FPGTGRGLMS KTSLREGQMI ISLPESCLIT 120
  121 TDTVIRSYLG TYIAKWQPPP SPLLALCTFL VSEKHAGDQS LWKPYLEILP QAYTCPVCLE 180
  181 PEVVNLFPKP LKAKAEEQRA RVQEFFSSSR DFFSSLQPLF SEAVESIFSY RALLWAWCTV 240
  241 NTRAVYVKHR QRQCFSTEPN TYALAPYLDL LNHSPEVQVK GAFNEETRCY EIRTASNCRK 300
  301 HEEVFICYGP HDNQRLLLEY GFVSIHNPHA CVYVSEDILV KYLPTTDKQM NKKISILKDH 360
  361 DFIENLTFGW DGPSWRLLTA LKLLCLEAEE FTCWKKVLLG EVISDTNEKT SLVIAQKICQ 420
  421 YFIEETNAML RKISHMKDEE VTLLNQLTLV ETLWTEELKI LQASAEILNS LQTPFR

Type	Start	End	Confidence
Signal Peptide	1	19	0.54
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	476	0.99