YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|74001330
Protein type: Transmembrane
Type Confidence: 0.85
Topology Confidence: 0.79
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSKRSISSR HHSLSTYEVL FIVLFALMVV LCAGLFAVSW LAIERSERDA VFGESHKARG  60
   61 TLKIISGATY NPNLQDKLSV DFKILAFDLQ QMINEIFQSS NLKNEYKNSR ILQFENGSII 120
  121 VIFDLFFARW VSDENVKEEL IQGIEANKSS QLVTFHIDLN SIDITASLEN FSTVSPATTS 180
  181 EKLTTSTPLT TPGNVSIECP PDSSPCADAL TCIAIDLFCD GELNCPDGSD EDNNTCATAC 240
  241 DGKFLLTGSS GSFQAAHYPK PSKSSVVCQW IIRVNPGLSI KLSFDYFNTF YTDVLNIYEG 300
  301 VGASKILRAS LWETNPDTIR IFSNQVTATF LIESDENDYI GFNATYTAFN STELNNYEKI 360
  361 NCSFEDGFCF WVQDLNDDNE WERIQGSTFP PFTGPNFDHT FHNDSGFYIS TPTGPGGRRE 420
  421 RVGLLSLPLD PTLEPVCLSF WYYMYGENVY KLSINISSDQ HMEKTVFQKE GNYGESWNYG 480
  481 QVTLNETVEF KVAFNAFKNQ ILSDIALDDI SLTYGICNVS LYPEPTLVPT PPPELPTDCG 540
  541 GPFELWEPNT TFTSMNFPNS YPNQAFCVWN LNAQKGKNIQ LHFQEFDLEN IADVVEVRDG 600
  601 GEDDSLLLAV YTGPGPVKDV FSTTNRMTVL FITDSQLAKG GFKANFTTGY YLGIPEPCKE 660
  661 DDFQCKNGEC VPLVNLCDGL PHCKDGSDEA HCVRLFNGTR NNNGLVQFRI LSRWHVACAD 720
  721 NWTAQISNDV CQLLGLGSGN SSMPIFSTGS GPFVKLNTAP NGSLILTPSE QCFQDSLILL 780
  781 QCNHKWCGNK LVAREFSPKI IGGNDAKEGA WPWVVSLYYN GHLLCGASLI SNDWLVSAAH 840
  841 CVYGRNLEPS KWKAILGLHM RSNMTSPQVV TRLIDQIVIN PHYNKRTKDS DIAVMHLDFK 900
  901 VNYTDYIQPI CLPEENQVFP PGSLCSIAGW GRVIYQGPTA NILQEANVPL LSNEKCQQQM 960
  961 PEYNITENMV CAGYEEGGID SCQGDSGGPL MCQENNRWFL AGVTSFGYQC ALPNRPGVYA1020
 1021 RVRRFTEWIQ SFLQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle